A decade of discovery: CRISPR functions and applications

被引:217
作者
Barrangou, Rodolphe [1 ]
Horvath, Philippe [2 ]
机构
[1] North Carolina State Univ, Dept Food Bioproc & Nutr Sci, 400 Dan Allen Dr,Campus Box 7624, Raleigh, NC 27695 USA
[2] DuPont Nutr & Hlth, BP10, F-86220 Dange St Romain, France
关键词
BACTERIAL IMMUNE-SYSTEM; RNA-GUIDED ENDONUCLEASE; SEQUENCE-SPECIFIC ANTIMICROBIALS; TARGET DNA RECOGNITION; CAS ADAPTIVE IMMUNITY; LACTIC-ACID BACTERIA; STREPTOCOCCUS-THERMOPHILUS; ESCHERICHIA-COLI; GENE-EXPRESSION; ACQUIRED-RESISTANCE;
D O I
10.1038/nmicrobiol.2017.92
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This year marks the tenth anniversary of the identification of the biological function of CRISPR-Cas as adaptive immune systems in bacteria. In just a decade, the characterization of CRISPR-Cas systems has established a novel means of adaptive immunity in bacteria and archaea and deepened our understanding of the interplay between prokaryotes and their environment, and CRISPR-based molecular machines have been repurposed to enable a genome editing revolution. Here, we look back on the historical milestones that have paved the way for the discovery of CRISPR and its function, and discuss the related technological applications that have emerged, with a focus on microbiology. Lastly, we provide a perspective on the impacts the field has had on science and beyond.
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页数:9
相关论文
共 147 条
[1]   C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector [J].
Abudayyeh, Omar O. ;
Gootenberg, Jonathan S. ;
Konermann, Silvana ;
Joung, Julia ;
Slaymaker, Ian M. ;
Cox, David B. T. ;
Shmakov, Sergey ;
Makarova, Kira S. ;
Semenova, Ekaterina ;
Minakhin, Leonid ;
Severinov, Konstantin ;
Regev, Aviv ;
Lander, Eric S. ;
Koonin, Eugene V. ;
Zhang, Feng .
SCIENCE, 2016, 353 (6299)
[2]   Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM [J].
Altermann, E ;
Russell, WM ;
Azcarate-Peril, MA ;
Barrangou, R ;
Buck, BL ;
McAuliffe, O ;
Souther, N ;
Dobson, A ;
Duong, T ;
Callanan, M ;
Lick, S ;
Hamrick, A ;
Cano, R ;
Klaenhammer, TR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (11) :3906-3912
[3]   Structural Plasticity of PAM Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9 [J].
Anders, Carolin ;
Bargsten, Katja ;
Jinek, Martin .
MOLECULAR CELL, 2016, 61 (06) :895-902
[4]   Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease [J].
Anders, Carolin ;
Niewoehner, Ole ;
Duerst, Alessia ;
Jinek, Martin .
NATURE, 2014, 513 (7519) :569-+
[5]   Virus population dynamics and acquired virus resistance in natural microbial communities [J].
Andersson, Anders F. ;
Banfield, Jillian F. .
SCIENCE, 2008, 320 (5879) :1047-1050
[6]   A prudent path forward for genomic engineering and germline gene modification [J].
Baltimore, David ;
Berg, Paul ;
Botchan, Michael ;
Carroll, Dana ;
Charo, R. Alta ;
Church, George ;
Corn, Jacob E. ;
Daley, George Q. ;
Doudna, Jennifer A. ;
Fenner, Marsha ;
Greely, Henry T. ;
Jinek, Martin ;
Martin, G. Steven ;
Penhoet, Edward ;
Puck, Jennifer ;
Sternberg, Samuel H. ;
Weissman, Jonathan S. ;
Yamamoto, Keith R. .
SCIENCE, 2015, 348 (6230) :36-38
[7]   CRISPR provides acquired resistance against viruses in prokaryotes [J].
Barrangou, Rodolphe ;
Fremaux, Christophe ;
Deveau, Helene ;
Richards, Melissa ;
Boyaval, Patrick ;
Moineau, Sylvain ;
Romero, Dennis A. ;
Horvath, Philippe .
SCIENCE, 2007, 315 (5819) :1709-1712
[8]   Applications of CRISPR technologies in research and beyond [J].
Barrangou, Rodolphe ;
Doudna, Jennifer A. .
NATURE BIOTECHNOLOGY, 2016, 34 (09) :933-941
[9]   CRISPR-Based Typing and Next-Generation Tracking Technologies [J].
Barrangou, Rodolphe ;
Dudley, Edward G. .
ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 7, 2016, 7 :395-411
[10]   Diversity of CRISPR-Cas immune systems and molecular machines [J].
Barrangou, Rodolphe .
GENOME BIOLOGY, 2015, 16