Evolvement of LEM proteins as chromatin tethers at the nuclear periphery

被引:109
作者
Brachner, Andreas [1 ]
Foisner, Roland [1 ]
机构
[1] Med Univ Vienna, Max F Perutz Labs, Vienna, Austria
关键词
chromatin organization; gene expression; helix-extension-helix (HeH); LEM domain; LEM protein; nuclear envelope; SAF/acinus/PIAS motif (SAP motif); TO-AUTOINTEGRATION FACTOR; DREIFUSS MUSCULAR-DYSTROPHY; DNA-BINDING PROPERTIES; MEMBRANE PROTEIN; GENE-EXPRESSION; TRANSCRIPTIONAL REPRESSION; CAENORHABDITIS-ELEGANS; IN-VITRO; CELLULAR-ORGANIZATION; GENOME ORGANIZATION;
D O I
10.1042/BST20110724
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The nuclear envelope in eukaryotic cells has important roles in chromatin organization. The inner nuclear membrane contains over 60 transmembrane proteins. LEM [LAP2 (lamina-associated polypeptide 2)/emerin/MAN1] domain-containing proteins of the inner nuclear membrane are involved in tethering chromatin to the nuclear envelope and affect gene expression. They contain a common structural, bihelical motif, the so-called LEM domain, which mediates binding to a conserved chromatin protein, BAF (barrier to autointegration factor). Interestingly, this domain is highly related to other bihelical motifs, termed HeH (helix-extension-helix) and SAP {SAF (scaffold attachment factor)/acinus/PIAS [protein inhibitor of activated STAT (signal transducer and activator of transcription)]} motifs, which are directly linked to DNA. In the present paper, we summarize evidence that the LEM motif evolved from the HeH and SAP domains concomitantly with BAF. In addition, we discuss the potential evolution of HeH/SAP and LEM domain-containing proteins and their role in chromatin tethering and gene regulation from unicellular eukaryotes to mammals.
引用
收藏
页码:1735 / 1741
页数:7
相关论文
共 70 条
[1]   Trends in protein evolution inferred from sequence and structure analysis [J].
Aravind, L ;
Mazumder, R ;
Vasudevan, S ;
Koonin, EV .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2002, 12 (03) :392-399
[2]   SAP - a putative DNA-binding motif involved in chromosomal organization [J].
Aravind, L ;
Koonin, EV .
TRENDS IN BIOCHEMICAL SCIENCES, 2000, 25 (03) :112-114
[3]   Comparative proteomic analyses of the nuclear envelope and pore complex suggests a wide range of heretofore unexpected functions [J].
Batrakou, Dzmitry G. ;
Kerr, Alastair R. W. ;
Schirmer, Eric C. .
JOURNAL OF PROTEOMICS, 2009, 72 (01) :56-70
[4]   Barrier-to-autointegration factor phosphorylation on Ser-4 regulates emerin binding to lamin A in vitro and emerin localization in vivo [J].
Bengtsson, L ;
Wilson, KL .
MOLECULAR BIOLOGY OF THE CELL, 2006, 17 (03) :1154-1163
[5]   Multiple and surprising new functions for emerin, a nuclear membrane protein [J].
Bengtsson, L ;
Wilson, KL .
CURRENT OPINION IN CELL BIOLOGY, 2004, 16 (01) :73-79
[6]   What MAN1 does to the smads -: TGFβ/BMP signaling and the nuclear envelope [J].
Bengtsson, Luiza .
FEBS JOURNAL, 2007, 274 (06) :1374-1382
[7]   Altered states: how gene expression is changed during differentiation [J].
Bickmore, Wendy A. ;
Zaret, Kenneth S. .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2010, 20 (05) :467-469
[8]   LEM2 is a novel MAN1-related inner nuclear membrane protein associated with A-type lamins [J].
Brachner, A ;
Reipert, S ;
Foisner, R ;
Gotzmann, J .
JOURNAL OF CELL SCIENCE, 2005, 118 (24) :5797-5810
[9]   Solution NMR structure of the barrier-to-autointegration factor-emerin complex [J].
Cai, Mengli ;
Huang, Ying ;
Suh, Jeong-Yong ;
Louis, John M. ;
Ghirlando, Rodolfo ;
Craigie, Robert ;
Clore, G. Marius .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (19) :14525-14535
[10]   Solution structure of the constant region of nuclear envelope protein LAP2 reveals two LEM-domain structures: one binds BAF and the other binds DNA [J].
Cai, ML ;
Huang, Y ;
Ghirlando, R ;
Wilson, KL ;
Craigie, R ;
Clore, GM .
EMBO JOURNAL, 2001, 20 (16) :4399-4407