TERMINATORS OF TRANSCRIPTION WITH RNA-POLYMERASE FROM ESCHERICHIA-COLI - WHAT THEY LOOK LIKE AND HOW TO FIND THEM

被引：108

作者：

BRENDEL, V ^{[1
]}

HAMM, GH ^{[1
]}

TRIFONOV, EN ^{[1
]}

机构：

[1] EUROPEAN MOLEC BIOL LAB, EMBL DATA LIB, D-6900 HEIDELBERG, FED REP GER

来源：

JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS | 1986年 / 3卷 / 04期

关键词：

D O I：

10.1080/07391102.1986.10508457

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

We present here a compilation of prokaryotic transcription terminator sequences (ref. 1-152). The compilation includes 49 independent terminators, 52 speculated independent terminators, 27 sites shown to function in vivo, and some 20 proven or speculated rho-dependent terminators. In addition to the well-known features of independent terminators (dyad symmetry and T-run), two consensus sequences are found: CGGG(C/G) upstream and TCTG downstream of the termination point. A subset of the collection of sequences has been used to construct a computer algorithm to locate independent terminators by sequence analysis.

引用

页码：705 / 723

页数：19

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