Zipf-scaling behavior in the immune system

被引:31
作者
Burgos, JD [1 ]
MorenoTovar, P [1 ]
机构
[1] PONTIFICIA UNIV JAVERIANA,FAC CIENCIAS,DEPT BIOL,BOGOTA,COLOMBIA
关键词
Zipf analysis; immune repertoires; fractals; scaling behavior;
D O I
10.1016/0303-2647(96)01618-8
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The Zipf law, an approach to analyzing linguistic texts, was applied to study the Cytotoxic T Lymphocytes (CTL) repertoire, one of the major components of the immune system. A Zipf-scaling behavior was observed in those CTL repertoires obtained in normal or conventional mice. In contrast, CTL repertoires from irradiated chimeric animals, showed a non-scaling statistical behavior when tested by the Zipf analysis,suggesting that normal repertoires work like a structured biological language. The fractal dimension (D) was derived from the Zipf plots, and correlates well with the nature of the repertoires: high, D > 0.8, in conventional mice. Non-fractal, D > 1, in chimeric animals, and low, D < 0.3, in athymic mice. Then, D seems to be an useful tool to characterize the current status of the immune system.
引用
收藏
页码:227 / 232
页数:6
相关论文
共 13 条
[1]   THE PHYSICS OF FRACTALS [J].
BAK, P ;
CHEN, K .
PHYSICA D, 1989, 38 (1-3) :5-12
[2]   SELF-ORGANIZED CRITICALITY - AN EXPLANATION OF 1/F NOISE [J].
BAK, P ;
TANG, C ;
WIESENFELD, K .
PHYSICAL REVIEW LETTERS, 1987, 59 (04) :381-384
[3]   Fractal representation of the immune B cell repertoire [J].
Burgos, JD .
BIOSYSTEMS, 1996, 39 (01) :19-24
[4]   POSITIVE AND NEGATIVE SELECTION OF ANTIBODY REPERTOIRES DURING B-CELL DIFFERENTIATION [J].
GRANDIEN, A ;
MODIGLIANI, Y ;
FREITAS, A ;
ANDERSSON, J ;
COUTINHO, A .
IMMUNOLOGICAL REVIEWS, 1994, 137 :53-89
[5]  
MALECKAR JR, 1987, J IMMUNOL, V138, P3873
[6]  
MANDELBROT B, 1982, FRACTAL GEOMETRY NAT, P341
[7]  
Mandelbrot B, 1954, WORD, V10, P1
[8]  
PANTALEO G, 1990, J IMMUNOL, V144, P1696
[9]   HUMAN-IMMUNODEFICIENCY-VIRUS GENETIC-VARIATION THAT CAN ESCAPE CYTOTOXIC T-CELL RECOGNITION [J].
PHILLIPS, RE ;
ROWLANDJONES, S ;
NIXON, DF ;
GOTCH, FM ;
EDWARDS, JP ;
OGUNLESI, AO ;
ELVIN, JG ;
ROTHBARD, JA ;
BANGHAM, CRM ;
RIZZA, CR ;
MCMICHAEL, AJ .
NATURE, 1991, 354 (6353) :453-459
[10]  
SHERMAN LA, 1985, J IMMUNOL, V134, P1330