Gene expression signature of fibroblast serum response predicts human cancer progression: Similarities between tumors and wounds

被引:762
作者
Chang, HY
Sneddon, JB
Alizadeh, AA
Sood, R
West, RB
Montgomery, K
Chi, JT
van de Rijn, M
Botstein, D
Brown, PO [2 ]
机构
[1] Stanford Univ, Sch Med, Dept Dermatol, Stanford, CA USA
[2] Stanford Univ, Sch Med, Dept Biochem, Stanford, CA USA
[3] Stanford Univ, Sch Med, Dept Pathol, Stanford, CA USA
[4] Stanford Univ, Sch Med, Dept Genet, Stanford, CA USA
[5] Stanford Univ, Sch Med, Howard Hughes Med Inst, Stanford, CA USA
关键词
D O I
10.1371/journal.pbio.0020007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cancer invasion and metastasis have been likened to wound healing gone awry. Despite parallels in cellular behavior between cancer progression and wound healing, the molecular relationships between these two processes and their prognostic implications are unclear. In this study, based on gene expression profiles of fibroblasts from ten anatomic sites, we identify a stereotyped gene expression program in response to serum exposure that appears to reflect the multifaceted role of fibroblasts in wound healing. The genes comprising this fibroblast common serum response are coordinately regulated in many human tumors, allowing us to identify tumors with gene expression signatures suggestive of active wounds. Genes induced in the fibroblast serum-response program are expressed in tumors by the tumor cells themselves, by tumor-associated fibroblasts, or both. The molecular features that define this wound-like phenotype are evident at an early clinical stage, persist during treatment, and predict increased risk of metastasis and death in breast, lung, and gastric carcinomas. Thus, the transcriptional signature of the response of fibroblasts to serum provides a possible link between cancer progression and wound healing, as well as a powerful predictor of the clinical course in several common carcinomas.
引用
收藏
页码:206 / 214
页数:9
相关论文
共 46 条
[21]   Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring [J].
Golub, TR ;
Slonim, DK ;
Tamayo, P ;
Huard, C ;
Gaasenbeek, M ;
Mesirov, JP ;
Coller, H ;
Loh, ML ;
Downing, JR ;
Caligiuri, MA ;
Bloomfield, CD ;
Lander, ES .
SCIENCE, 1999, 286 (5439) :531-537
[22]   Non-steroidal anti-inflammatory drugs and molecular carcinogenesis of colorectal carcinomas [J].
Huls, G ;
Koornstra, JJ ;
Kleibeuker, JH .
LANCET, 2003, 362 (9379) :230-232
[23]  
Iacobuzio-Donahue CA, 2002, CANCER RES, V62, P5351
[24]   The transcriptional program in the response of human fibroblasts to serum [J].
Iyer, VR ;
Eisen, MB ;
Ross, DT ;
Schuler, G ;
Moore, T ;
Lee, JCF ;
Trent, JM ;
Staudt, LM ;
Hudson, J ;
Boguski, MS ;
Lashkari, D ;
Shalon, D ;
Botstein, D ;
Brown, PO .
SCIENCE, 1999, 283 (5398) :83-87
[25]   Tissue microarrays for high-throughput molecular profiling of tumor specimens [J].
Kononen, J ;
Bubendorf, L ;
Kallioniemi, A ;
Bärlund, M ;
Schraml, P ;
Leighton, S ;
Torhorst, J ;
Mihatsch, MJ ;
Sauter, G ;
Kallioniemi, OP .
NATURE MEDICINE, 1998, 4 (07) :844-847
[26]   Significant up-regulation of a novel gene, CLCP1, in a highly metastatic lung cancer subline as well as in lung cancers in vivo [J].
Koshikawa, K ;
Osada, H ;
Kozaki, K ;
Konishi, H ;
Masuda, A ;
Tatematsu, Y ;
Mitsudomi, T ;
Nakao, A ;
Takahashi, T .
ONCOGENE, 2002, 21 (18) :2822-2828
[27]   Frequent somatic mutations in PTEN and TP53 are mutually exclusive in the stroma of breast carcinomas [J].
Kurose, K ;
Gilley, K ;
Matsumoto, S ;
Watson, PH ;
Zhou, XP ;
Eng, C .
NATURE GENETICS, 2002, 32 (03) :355-357
[28]   A mechanism of cyclin D1 action encoded in the patterns of gene expression in human cancer [J].
Lamb, J ;
Ramaswamy, S ;
Ford, HL ;
Contreras, B ;
Martinez, RV ;
Kittrell, FS ;
Zahnow, CA ;
Patterson, N ;
Golub, TR ;
Ewen, ME .
CELL, 2003, 114 (03) :323-334
[29]   Phospholipase A2 group IIA expression in gastric adenocarcinoma is associated with prolonged survival and less frequent metastasis [J].
Leung, SY ;
Chen, X ;
Chu, KM ;
Yuen, ST ;
Mathy, J ;
Ji, JF ;
Chan, ASY ;
Li, R ;
Law, S ;
Troyanskaya, OG ;
Tu, IP ;
Wong, J ;
So, S ;
Botstein, D ;
Brown, PO .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (25) :16203-16208
[30]   Software tools for high-throughput analysis and archiving of immunohistochemistry staining data obtained with tissue microarrays [J].
Liu, CL ;
Prapong, W ;
Natkunam, Y ;
Alizadeh, A ;
Montgomery, K ;
Gilks, CB ;
van de Rijn, M .
AMERICAN JOURNAL OF PATHOLOGY, 2002, 161 (05) :1557-1565