Conservation of mechanism in three chorismate-utilizing enzymes

被引:71
作者
He, Z
Lavoie, KDS
Bartlett, PA
Toney, MD [1 ]
机构
[1] Univ Calif Davis, Dept Chem, Davis, CA 95616 USA
[2] Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
关键词
D O I
10.1021/ja0389927
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Chorismate is the end-product of the shikimate pathway for biosynthesis of carbocyclic aromatic compounds in plants, bacteria, fungi, and some parasites. Anthranilate synthase (AS), 4-amino-4-deoxychorismate synthase (ADCS), and isochorismate synthase (IS) are homologous enzymes that carry out the initial transformations on chorismate in the biosynthesis of tryptophan, p-aminobenzoate, and enterobactin, respectively, and are expected to share a common mechanism. Poor binding to ADCS of two potential transition state analogues for addition of a nucleophile to C6 of chorismate implies that it, like AS and IS, initiates reaction by addition of a nucleophile to C2. Molecular modeling based on the X-ray structures of AS and ADCS suggests that the active site residue K274 is the nucleophile employed by ADCS to initiate the reaction, forming a covalent intermediate. The K274A and K274R mutants were shown to have 265- and 640-fold reduced k(cat) values when PabA (the cognate amidotransferase) + glutamine are used as the nitrogen source. Under conditions of saturating chorismate and NH4+, ADCS and the K274A mutant have identical k(cat) values, suggesting the participation of NH4+ as a rescue agent. Such participation was confirmed by the buildup of 2-amino-2-deoxyisochorismate in the reactions of the K274A mutant but not ADCS, when either NH4+ or PabA + glutamine is used as the nitrogen source. Additionally, the inclusion of ethylamine in the reactions of K274A yields the N-ethyl derivative of 2-amino-2-deoxyisochorismate. A unifying mechanism for AS, ADCS, and IS entailing nucleophile addition to C2 of chorismate in an S(N)2" process is proposed.
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页码:2378 / 2385
页数:8
相关论文
共 30 条
[1]   ISOLATION AND STRUCTURE ELUCIDATION OF THE 4-AMINO-4-DEOXYCHORISMATE INTERMEDIATE IN THE PABA= ENZYMATIC PATHWAY [J].
ANDERSON, KS ;
KATI, WM ;
YE, CZ ;
LIU, J ;
WALSH, CT ;
BENESI, AJ ;
JOHNSON, KA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (08) :3198-3200
[2]   ESCHERICHIA-COLI CHORISMATE SYNTHASE CATALYZES THE CONVERSION OF (6S)-6-FLUORO-5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE TO 6-FLUOROCHORISMATE - IMPLICATIONS FOR THE ENZYME MECHANISM AND THE ANTIMICROBIAL ACTION OF (6S)-6-FLUOROSHIKIMATE [J].
BORNEMANN, S ;
RAMJEE, MK ;
BALASUBRAMANIAN, S ;
ABELL, C ;
COGGINS, JR ;
LOWE, DJ ;
THORNELEY, RNF .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1995, 270 (39) :22811-22815
[3]   Interference with Pseudomonas quinolone signal synthesis inhibits virulence factor expression by Pseudomonas aeruginosa [J].
Calfee, MW ;
Coleman, JP ;
Pesci, EC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (20) :11633-11637
[4]  
DAVIDSON BE, 1987, METHOD ENZYMOL, V142, P432
[5]   (6S)-6-FLUOROSHIKIMIC ACID, AN ANTIBACTERIAL AGENT ACTING ON THE AROMATIC BIOSYNTHETIC-PATHWAY [J].
DAVIES, GM ;
BARRETTBEE, KJ ;
JUDE, DA ;
LEHAN, M ;
NICHOLS, WW ;
PINDER, PE ;
THAIN, JL ;
WATKINS, WJ ;
WILSON, RG .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1994, 38 (02) :403-406
[6]  
GREEN JM, 1991, J BIOL CHEM, V266, P12971
[7]   SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling [J].
Guex, N ;
Peitsch, MC .
ELECTROPHORESIS, 1997, 18 (15) :2714-2723
[8]   CHEMICAL RESCUE BY EXOGENOUS AMINES OF A SITE-DIRECTED MUTANT OF RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE THAT LACKS A KEY LYSYL RESIDUE [J].
HARPEL, MR ;
HARTMAN, FC .
BIOCHEMISTRY, 1994, 33 (18) :5553-5561
[9]   Chorismate lyase: kinetics and engineering for stability [J].
Holden, MJ ;
Mayhew, MP ;
Gallagher, DT ;
Vilker, VL .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 2002, 1594 (01) :160-167
[10]   Role of Lys100 in human dihydroorotate dehydrogenase: Mutagenesis studies and chemical rescue by external amines [J].
Jiang, WJ ;
Locke, G ;
Harpel, MR ;
Copeland, RA ;
Marcinkeviciene, J .
BIOCHEMISTRY, 2000, 39 (27) :7990-7997