Tryptophan zippers:: Stable, monomeric β-hairpins

被引:645
作者
Cochran, AG [1 ]
Skelton, NJ [1 ]
Starovasnik, MA [1 ]
机构
[1] Genentech Inc, Dept Prot Engn, S San Francisco, CA 94080 USA
关键词
D O I
10.1073/pnas.091100898
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A structural motif, the tryptophan zipper (trpzip), greatly stabilizes the beta -hairpin conformation in short peptides. Peptides (12 or it 16 aa in length) with four different turn sequences are monomeric and fold cooperatively in water, as has been observed previously for some hairpin peptides. However, the folding free energies of the trpzips exceed substantially those of all previously reported beta -hairpins and even those of some larger designed proteins. NMR structures of three of the trpzip peptides reveal exceptionally well-defined beta -hairpin conformations stabilized by cross-strand pairs of indole rings. The trpzips are the smallest peptides to adopt an unique tertiary fold without requiring metal binding, unusual amino acids, or disulfide crosslinks.
引用
收藏
页码:5578 / 5583
页数:6
相关论文
共 39 条
[31]   DETERMINATION OF THE SOLUTION STRUCTURE OF THE PEPTIDE-HORMONE GUANYLIN - OBSERVATION OF A NOVEL FORM OF TOPOLOGICAL STEREOISOMERISM [J].
SKELTON, NJ ;
GARCIA, KC ;
GOEDDEL, DV ;
QUAN, C ;
BURNIER, JP .
BIOCHEMISTRY, 1994, 33 (46) :13581-13592
[32]   Rules for antiparallel β-sheet design:: D-Pro-Gly is superior to L-Asn-Gly for β-hairpin nucleation [J].
Stanger, HE ;
Gellman, SH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (17) :4236-4237
[33]   Design of a monomeric 23-residue polypeptide with defined tertiary structure [J].
Struthers, MD ;
Cheng, RP ;
Imperiali, B .
SCIENCE, 1996, 271 (5247) :342-345
[34]   NMR-based quantification of β-sheet populations in aqueous solution through use of reference peptides for the folded and unfolded states [J].
Syud, FA ;
Espinosa, JF ;
Gellman, SH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (49) :11577-11578
[35]   CONSERVED STRUCTURAL FEATURES ON PROTEIN SURFACES - SMALL EXTERIOR HYDROPHOBIC CLUSTERS [J].
TISI, LC ;
EVANS, PA .
JOURNAL OF MOLECULAR BIOLOGY, 1995, 249 (02) :251-258
[36]   MAGIC-ANGLE-GRADIENT DOUBLE-QUANTUM-FILTERED COSY [J].
VANZIJL, PCM ;
JOHNSON, MO ;
MORI, S ;
HURD, RE .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1995, 113 (02) :265-270
[37]  
Wuthrich K., 1986, NMR PROTEINS NUCL AC, DOI DOI 10.1051/EPN/19861701011
[38]   FREE-ENERGY DETERMINANTS OF SECONDARY STRUCTURE FORMATION .2. ANTIPARALLEL BETA-SHEETS [J].
YANG, AS ;
HONIG, B .
JOURNAL OF MOLECULAR BIOLOGY, 1995, 252 (03) :366-376
[39]   Structural characterization of a mutant peptide derived from ubiquitin: Implications for protein folding [J].
Zerella, R ;
Chen, PY ;
Evans, PA ;
Raine, A ;
Williams, DH .
PROTEIN SCIENCE, 2000, 9 (11) :2142-2150