A highly automated heavy-atom search procedure for macromolecular structures

被引:47
作者
Grosse-Kunstleve, RW [1 ]
Brunger, AT
机构
[1] Yale Univ, Howard Hughes Med Inst, New Haven, CT 06520 USA
[2] Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 1999年 / 55卷
关键词
D O I
10.1107/S0907444999007763
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A new highly automated heavy-atom search procedure combines a fast Fourier transform translation function, Patterson superposition functions and Patterson correlation refinement. The search procedure can be applied to Various native and difference Patterson maps and their statistically weighted averages. The procedure was tested with diffraction data for several crystal structures with up to 30 heavy-atom sites in the asymmetric unit and with minimum Bragg spacings ranging from 3 to 4 Angstrom. In all cases, the correct sites were found with modest computing time.
引用
收藏
页码:1568 / 1577
页数:10
相关论文
共 40 条
[11]   Synapsin I is structurally similar to ATP-utilizing enzymes [J].
Esser, L ;
Wang, CR ;
Hosaka, M ;
Smagula, CS ;
Südhof, TC ;
Deisenhofer, J .
EMBO JOURNAL, 1998, 17 (04) :977-984
[13]   EXPERIENCES WITH A NEW TRANSLATION-FUNCTION PROGRAM [J].
FUJINAGA, M ;
READ, RJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1987, 20 :517-521
[14]   CRYSTALLOGRAPHIC STRUCTURE-ANALYSIS OF LAMPREY HEMOGLOBIN FROM ANOMALOUS DISPERSION OF SYNCHROTRON RADIATION [J].
HENDRICKSON, WA ;
SMITH, JL ;
PHIZACKERLEY, RP ;
MERRITT, EA .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1988, 4 (02) :77-88
[15]   DETERMINATION OF MACROMOLECULAR STRUCTURES FROM ANOMALOUS DIFFRACTION OF SYNCHROTRON RADIATION [J].
HENDRICKSON, WA .
SCIENCE, 1991, 254 (5028) :51-58
[16]   Three-dimensional structure of the armadillo repeat region of beta-catenin [J].
Huber, AH ;
Nelson, WJ ;
Weis, WI .
CELL, 1997, 90 (05) :871-882
[17]   LINEAR ALGEBRAIC ANALYSES OF STRUCTURES WITH ONE PREDOMINANT TYPE OF ANOMALOUS SCATTERER [J].
KARLE, J .
ACTA CRYSTALLOGRAPHICA SECTION A, 1989, 45 :303-307
[18]  
KOCH E, 1983, INT TABLES CRYSTALLO, VA, pCH15
[19]  
LIPSON H, 1957, DETERMINATION CRYSTA, P235
[20]  
McRee D.E., 1993, PRACTICAL PROTEIN CR