CRYSTALLIZATION AND INITIAL CRYSTALLOGRAPHIC RESULTS FOR PEPSTATIN-A INHIBITED BOVINE CATHEPSIN-D

被引:4
作者
BIEBER, F [1 ]
BRACHVOGEL, V [1 ]
ARNI, R [1 ]
FUSEK, M [1 ]
METCALF, P [1 ]
机构
[1] EUROPEAN MOLEC BIOL LAB,MEYERHOFSTR 1,POSTFACH 10-2209,W-6900 HEIDELBERG,GERMANY
关键词
CATHEPSIN-D; PEPSTATIN; ASPARTIC PROTEASE; LYSOSOMAL TARGETING; CRYSTAL;
D O I
10.1016/0022-2836(92)90539-V
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cathepsin D was purified from bovine liver by a method using two pepstatin A affinity columns. The eluted protein was combined with pepstatin A and the complex crystallized from 15% polyethylene glycol 8000 at pH 5·9. The crystals diffract to a resolution of 3·0 Å and have space group P212121 with unit cell dimensions a = 74·8 A ̊, b = 76·0 A ̊, c = 157·7 A ̊. There are two molecules in the asymmetric unit. The structure was solved by molecular replacement using a pepsin search model and both molecules showed clearly interpretable density in the position expected for pepstatin A in a preliminary difference map. The refined model has r.m.s. deviations from ideal bond lengths and angles of 0·014 Å and 3·2 °, respectively, and a crystallographic `R factor of 17%. © 1992.
引用
收藏
页码:1265 / 1268
页数:4
相关论文
共 19 条
[1]  
BARANSKI TJ, 1991, J BIOL CHEM, V266, P23365
[2]   GENERATION OF A LYSOSOMAL-ENZYME TARGETING SIGNAL IN THE SECRETORY PROTEIN PEPSINOGEN [J].
BARANSKI, TJ ;
FAUST, PL ;
KORNFELD, S .
CELL, 1990, 63 (02) :281-291
[3]   A SYSTEM FOR COLLECTION AND ONLINE INTEGRATION OF X-RAY-DIFFRACTION DATA FROM A MULTIWIRE AREA DETECTOR [J].
BLUM, M ;
METCALF, P ;
HARRISON, SC ;
WILEY, DC .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1987, 20 :235-242
[4]   3-DIMENSIONAL STRUCTURE OF THE COMPLEX OF THE RHIZOPUS-CHINENSIS CARBOXYL PROTEINASE AND PEPSTATIN AT 2.5-A RESOLUTION [J].
BOTT, R ;
SUBRAMANIAN, E ;
DAVIES, DR .
BIOCHEMISTRY, 1982, 21 (26) :6956-6962
[5]   FREE R-VALUE - A NOVEL STATISTICAL QUANTITY FOR ASSESSING THE ACCURACY OF CRYSTAL-STRUCTURES [J].
BRUNGER, AT .
NATURE, 1992, 355 (6359) :472-475
[6]   EXTENSION OF MOLECULAR REPLACEMENT - A NEW SEARCH STRATEGY BASED ON PATTERSON CORRELATION REFINEMENT [J].
BRUNGER, AT .
ACTA CRYSTALLOGRAPHICA SECTION A, 1990, 46 :46-57
[7]   THE STRUCTURE AND FUNCTION OF THE ASPARTIC PROTEINASES [J].
DAVIES, DR .
ANNUAL REVIEW OF BIOPHYSICS AND BIOPHYSICAL CHEMISTRY, 1990, 19 :189-215
[8]   PURIFICATION AND CRYSTALLIZATION OF HUMAN CATHEPSIN-D [J].
FUSEK, M ;
BAUDYS, M ;
METCALF, P .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 226 (02) :555-557
[9]   THIOL PROTEASE AND CATHEPSIN-D ACTIVITIES IN SELECTED TISSUES AND CULTURED-CELLS FROM NORMAL AND DYSTROPHIC MICE [J].
GOPALAN, P ;
DUFRESNE, MJ ;
WARNER, AH .
CANADIAN JOURNAL OF PHYSIOLOGY AND PHARMACOLOGY, 1987, 65 (02) :124-129
[10]   CO-LOCALIZATION OF MOLECULES INVOLVED IN ANTIGEN PROCESSING AND PRESENTATION IN AN EARLY ENDOCYTIC COMPARTMENT [J].
GUAGLIARDI, LE ;
KOPPELMAN, B ;
BLUM, JS ;
MARKS, MS ;
CRESSWELL, P ;
BRODSKY, FM .
NATURE, 1990, 343 (6254) :133-139