A FUNDAMENTAL DIVISION IN THE ALU FAMILY OF REPEATED SEQUENCES

被引：380

作者：

JURKA, J ^{[1
]}

SMITH, T ^{[1
]}

机构：

[1] HARVARD UNIV, SCH MED, SCH PUBL HLTH, DANA FARBER CANC INST, BOSTON, MA 02115 USA

来源：

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA | 1988年 / 85卷 / 13期

关键词：

D O I：

10.1073/pnas.85.13.4775

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

The Alu family of repeated sequences from the human genome contains two distinct subfamilies. This division is based on different base preferences in a number of diagnostic sequence positions. One subfamily of the sequences, referred to as the Alu-J subfamily, is very similar to 7SL DNA in these positions. The other subfamily, Alu-S, can be divided further into well-defined branches of sequences. These findings revise the previous picture of the Alu family and expose their complex evolutionary dynamics. They reveal sequence variations of potential importance for the proliferation of Alu repeats and relate them to their structural features. In addition, they open the possibility of using different types of Alu sequences as natural markers for studying genetic rearrangements in the genome.

引用

页码：4775 / 4778

页数：4

共 14 条

[1] THE MULTIPLE ORIGINS OF HUMAN ALU SEQUENCES [J].

BAINS, W .

JOURNAL OF MOLECULAR EVOLUTION, 1986, 23 (03) :189-199

[2] CPG ISLANDS AS GENE MARKERS IN THE VERTEBRATE NUCLEUS [J].

BIRD, AP .

TRENDS IN GENETICS, 1987, 3 (12) :342-347

[3] SOURCES AND EVOLUTION OF HUMAN ALU REPEATED SEQUENCES [J].

BRITTEN, RJ ;

BARON, WF ;

STOUT, DB ;

DAVIDSON, EH .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (13) :4770-4774

[4] INSERTION OF AN ALU SINE IN THE HUMAN HOMOLOG OF THE MLVI-2 LOCUS [J].

ECONOMOUPACHNIS, A ;

TSICHLIS, PN .

NUCLEIC ACIDS RESEARCH, 1985, 13 (23) :8379-8387

[5]

FAULKNER DV, 1988, IN PRESS TRENDS BIOC

[6] A MONKEY ALU SEQUENCE IS FLANKED BY 13-BASE-PAIR DIRECT REPEATS OF AN INTERRUPTED ALPHA-SATELLITE DNA-SEQUENCE [J].

GRIMALDI, G ;

SINGER, MF .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1982, 79 (05) :1497-1500

[7] STRUCTURE AND EVOLUTION OF THE 7SL-RNA COMPONENT OF THE SIGNAL RECOGNITION PARTICLE [J].

GUNDELFINGER, ED ;

DICARLO, M ;

ZOPF, D ;

MELLI, M .

EMBO JOURNAL, 1984, 3 (10) :2325-2332

[8] REVISION OF CONSENSUS SEQUENCE OF HUMAN ALU REPEATS - A REVIEW [J].

KARIYA, Y ;

KATO, K ;

HAYASHIZAKI, Y ;

HIMENO, S ;

TARUI, S ;

MATSUBARA, K .

GENE, 1987, 53 (01) :1-10

[9]

SLAGEL V, 1987, MOL BIOL EVOL, V4, P19

[10] IDENTIFICATION OF COMMON MOLECULAR SUBSEQUENCES [J].

SMITH, TF ;

WATERMAN, MS .

JOURNAL OF MOLECULAR BIOLOGY, 1981, 147 (01) :195-197

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