Applied Informatics Decision Support Tool for Mortality Predictions in Patients With Cancer

被引:48
作者
Bertsimas, Dimitris [2 ]
Dunn, Jack [2 ]
Pawlowski, Colin [2 ]
Silberholz, John [2 ]
Weinstein, Alexander [2 ]
Zhuo, Ying Daisy [2 ]
Chen, Eddy [3 ,4 ]
Elfiky, Aymen A. [1 ,4 ,5 ]
机构
[1] Dana Farber Canc Inst, 450 Brookline Ave, Boston, MA 02215 USA
[2] MIT, 77 Massachusetts Ave, Cambridge, MA 02139 USA
[3] Massachusetts Gen Hosp, Canc Ctr, Boston, MA 02114 USA
[4] Harvard Med Sch, Boston, MA 02115 USA
[5] Brigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
基金
美国国家科学基金会;
关键词
D O I
10.1200/CCI.18.00003
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Purpose With rapidly evolving treatment options in cancer, the complexity in the clinical decision-making process for oncologists represents a growing challenge magnified by oncologists' disposition of intuition-based assessment of treatment risks and overall mortality. Given the unmet need for accurate prognostication with meaningful clinical rationale, we developed a highly interpretable prediction tool to identify patients with high mortality risk before the start of treatment regimens. Methods We obtained electronic health record data between 2004 and 2014 from a large national cancer center and extracted 401 predictors, including demographics, diagnosis, gene mutations, treatment history, comorbidities, resource utilization, vital signs, and laboratory test results. We built an actionable tool using novel developments in modern machine learning to predict 60-, 90- and 180-day mortality from the start of an anticancer regimen. The model was validated in unseen data against benchmark models. Results We identified 23,983 patients who initiated 46,646 anticancer treatment lines, with a median survival of 514 days. Our proposed prediction models achieved significantly higher estimation quality in unseen data (area under the curve, 0.83 to 0.86) compared with benchmark models. We identified key predictors of mortality, such as change in weight and albumin levels. The results are presented in an interactive and interpretable tool (www.oncomortality.com). Conclusion Our fully transparent prediction model was able to distinguish with high precision between highest- and lowest-risk patients. Given the rich data available in electronic health records and advances in machine learning methods, this tool can have significant implications for value-based shared decision making at the point of care and personalized goals-of-care management to catalyze practice reforms. (C) 2018 by American Society of Clinical Oncology
引用
收藏
页码:1 / 11
页数:11
相关论文
共 31 条
[1]   Development of Imminent Mortality Predictor for Advanced Cancer (IMPAC), a Tool to Predict Short-Term Mortality in Hospitalized Patients With Advanced Cancer [J].
Adelson, Kerin ;
Lee, Donald K. K. ;
Velji, Salimah ;
Ma, Junchao ;
Lipka, Susan K. ;
Rimar, Joan ;
Longley, Peter ;
Vega, Teresita ;
Perez-Irizarry, Javier ;
Pinker, Edieal ;
Lilenbaum, Rogerio .
JOURNAL OF ONCOLOGY PRACTICE, 2018, 14 (03) :E168-E175
[2]  
Bertsimas D, J MACH LEARN RES
[3]   Optimal classification trees [J].
Bertsimas, Dimitris ;
Dunn, Jack .
MACHINE LEARNING, 2017, 106 (07) :1039-1082
[4]   A simple and accurate prediction model to estimate the intrahospital mortality risk of hospitalised cancer patients [J].
Bozcuk, H ;
Koyuncu, E ;
Yildiz, M ;
Samur, M ;
Özdogan, M ;
Artaç, M ;
Çoban, E .
INTERNATIONAL JOURNAL OF CLINICAL PRACTICE, 2004, 58 (11) :1014-1019
[5]   Trading treatment toxicity for survival in locally advanced non-small cell lung cancer [J].
Brundage, MD ;
Davidson, JR ;
Mackillop, WJ .
JOURNAL OF CLINICAL ONCOLOGY, 1997, 15 (01) :330-340
[6]  
Burke HB, 1997, CANCER, V79, P857, DOI 10.1002/(SICI)1097-0142(19970215)79:4<857::AID-CNCR24>3.0.CO
[7]  
2-Y
[8]   Risk classification of cancer survival using ANN with gene expression data from multiple laboratories [J].
Chen, Yen-Chen ;
Ke, Wan-Chi ;
Chiu, Hung-Wen .
COMPUTERS IN BIOLOGY AND MEDICINE, 2014, 48 :1-7
[9]   Prediction of survival in terminal cancer patients in Taiwan: Constructing a prognostic scale [J].
Chuang, RB ;
Hu, WY ;
Chiu, TY ;
Chen, CY .
JOURNAL OF PAIN AND SYMPTOM MANAGEMENT, 2004, 28 (02) :115-122
[10]   Leucovorin and fluorouracil with or without oxaliplatin as first-line treatment in advanced colorectal cancer [J].
de Gramont, A ;
Figer, A ;
Seymour, M ;
Homerin, M ;
Hmissi, A ;
Cassidy, J ;
Boni, C ;
Cortes-Funes, H ;
Cervantes, A ;
Freyer, G ;
Papamichael, D ;
Le Bail, N ;
Louvet, C ;
Hendler, D ;
de Braud, F ;
Wilson, C ;
Morvan, F ;
Bonetti, A .
JOURNAL OF CLINICAL ONCOLOGY, 2000, 18 (16) :2938-2947