The ProDom database of protein domain families: more emphasis on 3D

被引：229

作者：

Bru, C ^{[1
]}

Courcelle, E ^{[1
]}

Carrre, S ^{[1
]}

Beausse, Y ^{[1
]}

Dalmar, S ^{[1
]}

Kahn, D ^{[1
]}

机构：

[1] CNRS, INRA, Lab Interact Plantes Microorgan, F-31326 Castanet Tolosan, France

来源：

NUCLEIC ACIDS RESEARCH | 2005年 / 33卷

关键词：

D O I：

10.1093/nar/gki034

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

ProDom is a comprehensive database of protein domain families generated from the global comparison of all available protein sequences. Recent improvements include the use of three-dimensional (313) information from the SCOP database; a completely redesigned web interface (http://www. toulouse.inra.fr/prodom.htmi); visualization of ProDom domains on 3D structures; coupling of ProDom analysis with the Geno3D homology modelling server; Bayesian inference of evolutionary scenarios for ProDom families. In addition, we have developed ProDom-SG, a ProDom-based server dedicated to the selection of candidate proteins for structural genomics.

引用

页码：D212 / D215

页数：4

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