Bending dynamics of fluctuating biopolymers probed by automated high-resolution filament tracking

被引:126
作者
Brangwynne, Clifford P.
Koenderink, Gijsje H.
Barry, Ed
Dogic, Zvonimir
MacKintosh, Frederick C.
Weitz, David A. [1 ]
机构
[1] Harvard Univ, Harvard Sch Engn & Appl Sci, Cambridge, MA 02138 USA
[2] Rowland Inst Sci Inc, Cambridge, MA USA
[3] Vrije Univ Amsterdam, Dept Phys & Astron, Amsterdam, Netherlands
[4] Harvard Univ, Dept Phys, Cambridge, MA 02138 USA
基金
美国国家科学基金会;
关键词
D O I
10.1529/biophysj.106.096966
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Microscope images of. uctuating biopolymers contain a wealth of information about their underlying mechanics and dynamics. However, successful extraction of this information requires precise localization of. lament position and shape from thousands of noisy images. Here, we present careful measurements of the bending dynamics of filamentous ( F-) actin and microtubules at thermal equilibrium with high spatial and temporal resolution using a new, simple but robust, automated image analysis algorithm with subpixel accuracy. We. nd that slender actin. laments have a persistence length of similar to 17 mu m, and display a q(-4) -dependent relaxation spectrum, as expected from viscous drag. Microtubules have a persistence length of several millimeters; interestingly, there is a small correlation between total microtubule length and rigidity, with shorter filaments appearing softer. However, we show that this correlation can arise, in principle, from intrinsic measurement noise that must be carefully considered. The dynamic behavior of the bending of microtubules also appears more complex than that of F-actin, reflecting their higher-order structure. These results emphasize both the power and limitations of light microscopy techniques for studying the mechanics and dynamics of biopolymers.
引用
收藏
页码:346 / 359
页数:14
相关论文
共 38 条
[1]   DYNAMICS OF WORMLIKE CHAINS [J].
ARAGON, SR ;
PECORA, R .
MACROMOLECULES, 1985, 18 (10) :1868-1875
[2]  
Axelrod D, 2003, METHOD ENZYMOL, V361, P1
[3]   Microtubules can bear enhanced compressive loads in living cells because of lateral reinforcement [J].
Brangwynne, Clifford P. ;
MacKintosh, Frederick C. ;
Kumar, Sanjay ;
Geisse, Nicholas A. ;
Talbot, Jennifer ;
Mahadevan, L. ;
Parker, Kevin K. ;
Ingber, Donald E. ;
Weitz, David A. .
JOURNAL OF CELL BIOLOGY, 2006, 173 (05) :733-741
[4]   Quantitative comparison of algorithms for tracking single fluorescent particles [J].
Cheezum, MK ;
Walker, WF ;
Guilford, WH .
BIOPHYSICAL JOURNAL, 2001, 81 (04) :2378-2388
[5]   Methods of digital video microscopy for colloidal studies [J].
Crocker, JC ;
Grier, DG .
JOURNAL OF COLLOID AND INTERFACE SCIENCE, 1996, 179 (01) :298-310
[6]   Tracking differential interference contrast diffraction line images with nanometre sensitivity [J].
Danuser, G ;
Tran, PT ;
Salmon, ED .
JOURNAL OF MICROSCOPY, 2000, 198 (198) :34-53
[7]  
Felgner H, 1996, J CELL SCI, V109, P509
[8]   Microrheology of entangled F-actin solutions [J].
Gardel, ML ;
Valentine, MT ;
Crocker, JC ;
Bausch, AR ;
Weitz, DA .
PHYSICAL REVIEW LETTERS, 2003, 91 (15)
[9]   Elastic Behavior of cross-linked and bundled actin networks [J].
Gardel, ML ;
Shin, JH ;
MacKintosh, FC ;
Mahadevan, L ;
Matsudaira, P ;
Weitz, DA .
SCIENCE, 2004, 304 (5675) :1301-1305
[10]   Scaling of the microrheology of semidilute F-actin solutions [J].
Gisler, T ;
Weitz, DA .
PHYSICAL REVIEW LETTERS, 1999, 82 (07) :1606-1609