Homology modeling of glycosyl hydrolase family 18 enzymes and proteins

被引:35
作者
Aronson, NN
Blanchard, CJ
Madura, JD
机构
[1] UNIV S ALABAMA,COLL ARTS & SCI,DEPT CHEM,MOBILE,AL 36688
[2] UNIV S ALABAMA,COLL MED,DEPT BIOCHEM & MOL BIOL,MOBILE,AL 36688
来源
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES | 1997年 / 37卷 / 06期
关键词
D O I
10.1021/ci970236v
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Using state-of-the-art homology modeling methods, three-dimensional coordinates for three family 18 glycosyl hydrolases were determined. The structures for Gp39, Brp39, and chitotriosidase were computer determined using the X-ray coordinates from SmChiA. The results of the modeling efforts are assessed, and comparison of the modeled structures to other known family 18 members is made.
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收藏
页码:999 / 1005
页数:7
相关论文
共 25 条
[1]   RAT-LIVER CHITOBIASE - PURIFICATION, PROPERTIES, AND ROLE IN THE LYSOSOMAL DEGRADATION OF ASN-LINKED GLYCOPROTEINS [J].
ARONSON, NN ;
BACKES, M ;
KURANDA, MJ .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1989, 272 (02) :290-300
[2]  
BASSLER BL, 1991, J BIOL CHEM, V266, P24276
[3]  
DAVIES G, 1995, STRUCTURE, V3, P852
[4]   Nomenclature for sugar-binding subsites in glycosyl hydrolases [J].
Davies, GJ ;
Wilson, KS ;
Henrissat, B .
BIOCHEMICAL JOURNAL, 1997, 321 :557-559
[5]   AN ESTROGEN-DEPENDENT SECRETORY PROTEIN, WHICH SHARES IDENTITY WITH CHITINASES, IS EXPRESSED IN A TEMPORALLY AND REGIONALLY SPECIFIC MANNER IN THE SHEEP OVIDUCT AT THE TIME OF FERTILIZATION AND EMBRYO DEVELOPMENT [J].
DESOUZA, MM ;
MURRAY, MK .
ENDOCRINOLOGY, 1995, 136 (06) :2485-2496
[6]  
FISHER KJ, 1992, J BIOL CHEM, V267, P19607
[7]  
HAKALA BE, 1993, J BIOL CHEM, V268, P25803
[8]   Updating the sequence-based classification of glycosyl hydrolases [J].
Henrissat, B ;
Bairoch, A .
BIOCHEMICAL JOURNAL, 1996, 316 :695-696
[9]   A CLASSIFICATION OF GLYCOSYL HYDROLASES BASED ON AMINO-ACID-SEQUENCE SIMILARITIES [J].
HENRISSAT, B .
BIOCHEMICAL JOURNAL, 1991, 280 :309-316
[10]   NEW FAMILIES IN THE CLASSIFICATION OF GLYCOSYL HYDROLASES BASED ON AMINO-ACID-SEQUENCE SIMILARITIES [J].
HENRISSAT, B ;
BAIROCH, A .
BIOCHEMICAL JOURNAL, 1993, 293 :781-788