Archiving next generation sequencing data

被引:85
作者
Shumway, Martin [1 ]
Cochrane, Guy [2 ]
Sugawara, Hideaki [3 ]
机构
[1] NIH, Natl Ctr Biotechnol Informat, Natl Lib Med, Bethesda, MD 20894 USA
[2] EMBL European Bioinformat Inst, Cambridge, England
[3] Corp Res Org Informat & Syst, Interuniv Res Inst, Natl Inst Genet, DNA Data Bank Japan, Shizuoka, Japan
基金
英国惠康基金;
关键词
NATIONAL CENTER; RESOURCES;
D O I
10.1093/nar/gkp1078
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Next generation sequencing platforms are producing biological sequencing data in unprecedented amounts. The partners of the International Nucleotide Sequencing Database Collaboration, which includes the National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EBI), and the DNA Data Bank of Japan (DDBJ), have established the Sequence Read Archive (SRA) to provide the scientific community with an archival destination for next generation data sets. The SRA is now accessible at http://www.ncbi.nlm.nih.gov/Traces/sra from NCBI, at http://www.ebi.ac.uk/ena from EBI and at http://www.ddbj.nig.ac.jp/sub/trace_sra-e.html from DDBJ. Users of these resources can obtain data sets deposited in any of the three SRA instances. Links and submission instructions are provided.
引用
收藏
页码:D870 / D871
页数:2
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