Modelling with knowledge: A review of emerging semantic approaches to environmental modelling

被引:96
作者
Villa, Ferdinando [1 ,2 ]
Athanasiadis, Ioannis N. [3 ]
Rizzoli, Andrea Emilio [3 ]
机构
[1] Univ Vermont, Gund Inst Ecol Econ, Burlington, VT 05405 USA
[2] Univ Vermont, Dept Plant Biol, Burlington, VT USA
[3] Ist Dalle Molle Studi Intelligenza Artificiale, Lugano, Switzerland
基金
美国国家科学基金会;
关键词
Semantic modelling; Ontologies; Semantic annotation; Model and data integration; Conceptual design; Model-based query; ONTOLOGY; DESIGN; TOOL; MULTIPARADIGM; TRANSPARENT; FRAMEWORK; SYSTEMS; WEB;
D O I
10.1016/j.envsoft.2008.09.009
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Models, and to a lesser extent datasets, embody sophisticated statements of environmental knowledge. Yet, the knowledge they incorporate is rarely self-contained enough for them to be understood and used by humans or machines - without the modeller's mediation. This severely limits the options in reusing environmental models and connecting them to datasets or other models. The notion of "declarative modelling" has been suggested as a remedy to help design, communicate, share and integrate models. Yet, not all these objectives have been achieved by declarative modelling in its current implementations. Semantically aware environmental modelling is a way of designing, implementing and deploying environmental datasets and models based on the independent, standardized formalization of the underlying environmental science. It can be seen as the result of merging the rationale of declarative modelling with modern knowledge representation theory, through the mediation of the integrative vision of a Semantic Web. In this paper, we review the present and preview the future of semantic modelling in environmental science: from the mediation approach, where formal knowledge is the key to automatic integration of datasets, models and analytical pipelines, to the knowledge-cl riven approach, where the knowledge is the key not only to integration, but also to overcoming scale and paradigm differences and to novel potentials for model design and automated knowledge discovery. (c) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:577 / 587
页数:11
相关论文
共 62 条
[1]  
*AGROVOC, 2006, AGROVOC MULT DICT UN
[2]  
[Anonymous], 2003, DESCRIPTION LOGIC HD
[3]   Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[4]  
Athanasiadis I. N., 2006, IT Professional, V8, P34, DOI 10.1109/MITP.2006.57
[5]  
Athanasiadis I.N., 2007, Agent and Web Service Technologies in Virtual Enterprises, P256
[6]  
ATHANASIADIS IN, 2006, 3 BIENN M INT ENV MO
[7]  
ATHANASIADIS IN, 2007, P 31 IEEE ANN INT CO, V2, P341
[8]  
ATHANASIADIS IN, 2007, P 3 INT WORKSH SEM W, P16
[9]  
Baker KS, 2000, BIOSCIENCE, V50, P963, DOI 10.1641/0006-3568(2000)050[0963:EOAMNI]2.0.CO
[10]  
2