Copy-number variants in neurodevelopmental disorders: promises and challenges

被引:91
作者
Merikangas, Alison K. [1 ]
Corvin, Aiden P. [1 ]
Gallagher, Louise [1 ]
机构
[1] St James Hosp, Trinity Ctr Hlth Sci, Dept Psychiat, Dublin 8, Ireland
关键词
GENOME-WIDE ASSOCIATION; STRUCTURAL VARIATION; GENETIC-ASSOCIATION; RECURRENT REARRANGEMENTS; AUTISM; SCHIZOPHRENIA; RISK; DISEASE; REVEALS; COMMON;
D O I
10.1016/j.tig.2009.10.006
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Copy-number variation (CNV) is the most prevalent type of structural variation in the human genome. There is emerging evidence that copy-number variants (CNVs) provide a new vista on understanding susceptibility to neuropsychiatric disorders. Some challenges in the interpretation of current CNV studies include the use of overlapping samples, differing phenotypic definitions, an absence of population norms for CNVs and a lack of consensus in methods for CNV detection and analysis. Here, we review current CNV association study methods and results in autism spectrum disorders (ASD) and schizophrenia, and provide suggestions for design approaches to future studies that might maximize the translation of this work to etiological understanding.
引用
收藏
页码:536 / 544
页数:9
相关论文
共 95 条
[1]   Cannabis use in adolescence and risk for adult psychosis: longitudinal prospective study [J].
Arseneault, L ;
Cannon, M ;
Poulton, R ;
Murray, R ;
Caspi, A ;
Moffitt, TE .
BRITISH MEDICAL JOURNAL, 2002, 325 (7374) :1212-1213
[2]   A robust statistical method for case-control association testing with copy number variation [J].
Barnes, Chris ;
Plagnol, Vincent ;
Fitzgerald, Tomas ;
Redon, Richard ;
Marchini, Jonathan ;
Clayton, David ;
Hurles, Matthew E. .
NATURE GENETICS, 2008, 40 (10) :1245-1252
[3]   Copy number variations and risk for schizophrenia in 22q11.2 deletion syndrome [J].
Bassett, Anne S. ;
Marshall, Christian R. ;
Lionel, Anath C. ;
Chow, Eva W. C. ;
Scherer, Stephen W. .
HUMAN MOLECULAR GENETICS, 2008, 17 (24) :4045-4053
[4]   Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability [J].
Beckmann, Jacques S. ;
Estivill, Xavier ;
Antonarakis, Stylianos E. .
NATURE REVIEWS GENETICS, 2007, 8 (08) :639-646
[5]   Phenotypically concordant and discordant monozygotic twins display different DNA copy-number-variation profiles [J].
Bruder, Carl E. G. ;
Piotrowski, Arkadiusz ;
Gijsbers, Antoinet A. C. J. ;
Andersson, Robin ;
Erickson, Stephen ;
de Stahl, Teresita Diaz ;
Menzel, Uwe ;
Sandgren, Johanna ;
von Tell, Desiree ;
Poplawski, Andrzej ;
Crowley, Michael ;
Crasto, Chiquito ;
Partridge, E. Christopher ;
Tiwari, Hemant ;
Allison, David B. ;
Komorowski, Jan ;
van Ommen, Gert-Jan B. ;
Boomsma, Dorret I. ;
Pedersen, Nancy L. ;
den Dunnen, Johan T. ;
Wirdefeldt, Karin ;
Dumanski, Jan P. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2008, 82 (03) :763-771
[6]   Genome-Wide Analyses of Exonic Copy Number Variants in a Family-Based Study Point to Novel Autism Susceptibility Genes [J].
Bucan, Maja ;
Abrahams, Brett S. ;
Wang, Kai ;
Glessner, Joseph T. ;
Herman, Edward I. ;
Sonnenblick, Lisa I. ;
Retuerto, Ana I. Alvarez ;
Imielinski, Marcin ;
Hadley, Dexter ;
Bradfield, Jonathan P. ;
Kim, Cecilia ;
Gidaya, Nicole B. ;
Lindquist, Ingrid ;
Hutman, Ted ;
Sigman, Marian ;
Kustanovich, Vlad ;
Lajonchere, Clara M. ;
Singleton, Andrew ;
Kim, Junhyong ;
Wassink, Thomas H. ;
McMahon, William M. ;
Owley, Thomas ;
Sweeney, John A. ;
Coon, Hilary ;
Nurnberger, John I., Jr. ;
Li, Mingyao ;
Cantor, Rita M. ;
Minshew, Nancy J. ;
Sutcliffe, James S. ;
Cook, Edwin H. ;
Dawson, Geraldine ;
Buxbaum, Joseph D. ;
Grant, Struan F. A. ;
Schellenberg, Gerard D. ;
Geschwind, Daniel H. ;
Hakonarson, Hakon .
PLOS GENETICS, 2009, 5 (06)
[7]   Maternal cytokine levels during pregnancy and adult psychosis [J].
Buka, SL ;
Tsuang, MT ;
Torrey, EF ;
Klebanoff, MA ;
Wagner, RL ;
Yolken, RH .
BRAIN BEHAVIOR AND IMMUNITY, 2001, 15 (04) :411-420
[8]   Methods and strategies for analyzing copy number variation using DNA microarrays [J].
Carter, Nigel P. .
NATURE GENETICS, 2007, 39 (Suppl 7) :S16-S21
[9]   Replicating genotype-phenotype associations [J].
Chanock, Stephen J. ;
Manolio, Teri ;
Boehnke, Michael ;
Boerwinkle, Eric ;
Hunter, David J. ;
Thomas, Gilles ;
Hirschhorn, Joel N. ;
Abecasis, Goncalo ;
Altshuler, David ;
Bailey-Wilson, Joan E. ;
Brooks, Lisa D. ;
Cardon, Lon R. ;
Daly, Mark ;
Donnelly, Peter ;
Fraumeni, Joseph F., Jr. ;
Freimer, Nelson B. ;
Gerhard, Daniela S. ;
Gunter, Chris ;
Guttmacher, Alan E. ;
Guyer, Mark S. ;
Harris, Emily L. ;
Hoh, Josephine ;
Hoover, Robert ;
Kong, C. Augustine ;
Merikangas, Kathleen R. ;
Morton, Cynthia C. ;
Palmer, Lyle J. ;
Phimister, Elizabeth G. ;
Rice, John P. ;
Roberts, Jerry ;
Rotimi, Charles ;
Tucker, Margaret A. ;
Vogan, Kyle J. ;
Wacholder, Sholom ;
Wijsman, Ellen M. ;
Winn, Deborah M. ;
Collins, Francis S. .
NATURE, 2007, 447 (7145) :655-660
[10]   Copy number variations associated with idiopathic autism identified by whole-genome microarray-based comparative genomic hybridization [J].
Cho, Soo Churl ;
Yim, Seon-Hee ;
Yoo, Hanik K. ;
Kim, Mi-Young ;
Jung, Gyoo Yeol ;
Shin, Gi Won ;
Kim, Boong-Nyun ;
Hwang, Jun Won ;
Kang, Jason Jongho ;
Kim, Tae-Min ;
Chung, Yeun-Jun .
PSYCHIATRIC GENETICS, 2009, 19 (04) :177-185