An overview of CellML 1.1, a biological model description language

被引：218

作者：

Cuellar, AA ^{[1
]}

Lloyd, CM ^{[1
]}

Nielsen, PF ^{[1
]}

Bullivant, DP ^{[1
]}

Nickerson, DP ^{[1
]}

Hunter, PJ ^{[1
]}

机构：

[1] Univ Auckland, Bioengn Inst, Auckland, New Zealand

来源：

SIMULATION-TRANSACTIONS OF THE SOCIETY FOR MODELING AND SIMULATION INTERNATIONAL | 2003年 / 79卷 / 12期

关键词：

biological model; XML; markup language; mathematical model;

D O I：

10.1177/0037549703040939

中图分类号：

TP39 [计算机的应用];

学科分类号：

081203 ; 0835 ;

摘要：

CellML is an XML-based exchange format developed by the University of Auckland in collaboration with Physiome Sciences, Inc. CellML 1.1 has a component-based architecture allowing a modeller to build complex systems of models that expand and reuse previously published models. CellML Metadata is a format for encoding contextual information for a model. CellML 1.1 can be used in conjunction with CellML Metadata to provide a complete description of the structure and underlying mathematics of biological models. A repository of over 200 electrophysiological, mechanical, signal transduction, and metabolic pathway models is available at www.cellml.org.

引用

页码：740 / 747

页数：8