GoFigure:: Automated gene Ontology™ annotation

被引:110
作者
Khan, S
Situ, G
Decker, K
Schmidt, CJ [1 ]
机构
[1] Univ Delaware, Dept Anim & Food Sci, Newark, DE 19717 USA
[2] Univ Delaware, Dept Comp & Informat Sci, Newark, DE 19717 USA
关键词
D O I
10.1093/bioinformatics/btg338
中图分类号
Q5 [生物化学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
We have developed a web tool to predict Gene Ontology (GO) terms. The tool accepts an input DNA or protein sequence, and uses BLAST to identify homologous sequences in GO annotated databases. A graph is returned to the user via email.
引用
收藏
页码:2484 / 2485
页数:2
相关论文
共 8 条
[1]
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]
Ashburner M, 2001, GENOME RES, V11, P1425
[3]
Computational methods for the identification of genes in vertebrate genomic sequences [J].
Claverie, JM .
HUMAN MOLECULAR GENETICS, 1997, 6 (10) :1735-1744
[4]
Gansner ER, 2000, SOFTWARE PRACT EXPER, V30, P1203, DOI 10.1002/1097-024X(200009)30:11<1203::AID-SPE338>3.0.CO
[5]
2-N
[6]
Genome and genetic resources from the Cancer Genome Anatomy Project [J].
Riggins, GJ ;
Strausberg, RL .
HUMAN MOLECULAR GENETICS, 2001, 10 (07) :663-667
[7]
SELINA SD, 2002, NUCLEIC ACIDS RES, V30, P69
[8]
Sequence analysis of genes and genomes [J].
Sterky, F ;
Lundeberg, J .
JOURNAL OF BIOTECHNOLOGY, 2000, 76 (01) :1-31