An introduction to bioinformatics for glycomics research

被引：40

作者：

Aoki-Kinoshita, Kiyoko F. ^{[1
]}

机构：

[1] Soka Univ, Dept Bioinformat, Tokyo, Japan

来源：

PLOS COMPUTATIONAL BIOLOGY | 2008年 / 4卷 / 05期

关键词：

D O I：

10.1371/journal.pcbi.1000075

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

[No abstract available]

引用

页数：7

共 48 条

[1] A score matrix to reveal the hidden links in glycans [J].

Aoki, KF ;

Mamitsuka, H ;

Akutsu, T ;

Kanehisa, M .

BIOINFORMATICS, 2005, 21 (08) :1457-1463

[2] KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains [J].

Aoki, KF ;

Yamaguchi, A ;

Ueda, N ;

Akutsu, T ;

Mamitsuka, H ;

Goto, S ;

Kanehisa, M .

NUCLEIC ACIDS RESEARCH, 2004, 32 :W267-W272

[3] Application of a new probabilistic model for recognizing complex patterns in glycans [J].

Aoki, Kiyoko F. ;

Ueda, Nobuhisa ;

Yamaguchi, Atsuko ;

Kanehisa, Minoru ;

Akutsu, Tatsuya ;

Mamitsuka, Hiroshi .

BIOINFORMATICS, 2004, 20 :6-14

[4] ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains [J].

Aoki-Kinoshita, Kiyoko F. ;

Ueda, Nobuhisa ;

Mamitsuka, Hiroshi ;

Kanehisa, Minoru .

BIOINFORMATICS, 2006, 22 (14) :E25-E34

[5] On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database [J].

Apweiler, R ;

Hermjakob, H ;

Sharon, N .

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1999, 1473 (01) :4-8

[6] A novel Linear Code® nomenclature for complex carbohydrates [J].

Banin, E ;

Neuberger, Y ;

Altshuler, Y ;

Halevi, A ;

Inbar, O ;

Nir, D ;

Dukler, A .

TRENDS IN GLYCOSCIENCE AND GLYCOTECHNOLOGY, 2002, 14 (77) :127-137

[7] GlyProt:: in silico glycosylation of proteins [J].

Bohne-Lang, A ;

von der Lieth, CW .

NUCLEIC ACIDS RESEARCH, 2005, 33 :W214-W219

[8]

Cooper CA, 2001, PROTEOMICS, V1, P340, DOI 10.1002/1615-9861(200102)1:2<340::AID-PROT340>3.3.CO

[9]

2-2

[10]

Dayhoff M.O., 1978, ATLAS PROTEIN SEQ ST, V5

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