SWI/SNF chromatin remodeling requires changes in DNA topology

被引:100
作者
Gavin, I [1 ]
Horn, PJ [1 ]
Peterson, CL [1 ]
机构
[1] Univ Massachusetts, Sch Med, Dept Biochem & Mol Biol, Program Mol Med, Worcester, MA 01605 USA
关键词
D O I
10.1016/S1097-2765(01)00158-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ySWI/SNF complex belongs to a family of enzymes that use the energy of ATP hydrolysis to remodel chromatin structure. Here we examine the role of DNA topology in the mechanism of ySWI/SNF remodeling. We find that the ability of ySWI/SNF to enhance accessibility of nucleosomal DNA is nearly eliminated when DNA topology is constrained in small circular nucleosomal arrays and that this inhibition can be alleviated by topoisomerases. Furthermore, we demonstrate that remodeling of these substrates does not require dramatic histone octamer movements or displacement. Our results suggest a model in which ySWI/SNF remodels nucleosomes by using the energy of ATP hydrolysis to drive local changes in DNA twist.
引用
收藏
页码:97 / 104
页数:8
相关论文
共 30 条
[1]  
Bazett-Jones DP, 1999, MOL CELL BIOL, V19, P1470
[2]   Roles of the histone H2A-H2B dimers and the (H3-H4)2 tetramer in nucleosome remodeling by the SWI-SNF complex [J].
Boyer, LA ;
Shao, X ;
Ebright, RH ;
Peterson, CL .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (16) :11545-11552
[3]   Functional delineation of three groups of the ATP-dependent family of chromatin remodeling enzymes [J].
Boyer, LA ;
Logie, C ;
Bonte, E ;
Becker, PB ;
Wade, PA ;
Wolffe, AP ;
Wu, C ;
Imbalzano, AN ;
Peterson, CL .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (25) :18864-18870
[4]   STIMULATION OF GAL4 DERIVATIVE BINDING TO NUCLEOSOMAL DNA BY THE YEAST SWI/SNF COMPLEX [J].
COTE, J ;
QUINN, J ;
WORKMAN, JL ;
PETERSON, CL .
SCIENCE, 1994, 265 (5168) :53-60
[5]   Perturbation of nucleosome core structure by the SWI/SNF complex persists after its detachment, enhancing subsequent transcription factor binding [J].
Côté, J ;
Peterson, CL ;
Workman, JL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (09) :4947-4952
[6]   Mammalian SWI-SNF complexes contribute to activation of the hsp70 gene [J].
De la Serna, IL ;
Carlson, KA ;
Hill, DA ;
Guidi, CJ ;
Stephenson, RO ;
Sif, S ;
Kingston, RE ;
Imbalzano, AN .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (08) :2839-2851
[7]   The ISWI chromatin-remodeling protein is required for gene expression and the maintenance of higher order chromatin structure in vivo [J].
Deuring, R ;
Fanti, L ;
Armstrong, JA ;
Sarte, M ;
Papoulas, O ;
Prestel, M ;
Daubresse, G ;
Verardo, M ;
Moseley, SL ;
Berloco, M ;
Tsukiyama, T ;
Wu, C ;
Pimpinelli, S ;
Tamkun, JW .
MOLECULAR CELL, 2000, 5 (02) :355-365
[8]   EVOLUTION OF THE SNF2 FAMILY OF PROTEINS - SUBFAMILIES WITH DISTINCT SEQUENCES AND FUNCTIONS [J].
EISEN, JA ;
SWEDER, KS ;
HANAWALT, PC .
NUCLEIC ACIDS RESEARCH, 1995, 23 (14) :2715-2723
[9]   CHROMATIN RECONSTITUTION ON SMALL DNA RINGS .I. [J].
GOULET, I ;
ZIVANOVIC, Y ;
PRUNELL, A ;
REVET, B .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 200 (02) :253-266
[10]   Generation of superhelical torsion by ATP-dependent chromatin remodeling activities [J].
Havas, K ;
Flaus, A ;
Phelan, M ;
Kingston, R ;
Wade, PA ;
Lilley, DMJ ;
Owen-Hughes, T .
CELL, 2000, 103 (07) :1133-1142