Stochastic modelling for quantitative description of heterogeneous biological systems

被引:391
作者
Wilkinson, Darren J. [1 ,2 ]
机构
[1] Univ Newcastle, Sch Math & Stat, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[2] Univ Newcastle, CISBAN, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
基金
英国生物技术与生命科学研究理事会;
关键词
P53-MDM2 FEEDBACK LOOP; BAYESIAN-INFERENCE; GENE-EXPRESSION; PARAMETER-ESTIMATION; REGULATORY NETWORKS; PROTEIN EXPRESSION; INDIVIDUAL CELLS; CAUSAL NETWORKS; SIMULATION; SELECTION;
D O I
10.1038/nrg2509
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Two related developments are currently changing traditional approaches to computational systems biology modelling. First, stochastic models are being used increasingly in preference to deterministic models to describe biochemical network dynamics at the single-cell level. Second, sophisticated statistical methods and algorithms are being used to fit both deterministic and stochastic models to time course and other experimental data. Both frameworks are needed to adequately describe observed noise, variability and heterogeneity of biological systems over a range of scales of biological organization.
引用
收藏
页码:122 / 133
页数:12
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