Calculation of the potential energy surface for intermolecular amide hydrogen bonds using semiempirical and ab initio methods

被引:67
作者
Adalsteinsson, H [1 ]
Maulitz, AH [1 ]
Bruice, TC [1 ]
机构
[1] UNIV CALIF SANTA BARBARA, DEPT CHEM, SANTA BARBARA, CA 93106 USA
关键词
D O I
10.1021/ja954267n
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The dependence of hydrogen-bond interaction energies between identical amides (two formamides and two N-methylacetamides) on the hydrogen bond length (r(O ... H)), the two hydrogen bond angles (theta(COH) and theta(NHO)), and the dihedral between the two amides (Phi(CNCN)) has been assessed by semiempirical calculations (SAM1 with single point transfers to AM1/SM2.1 aqueous solvation calculations). Ab initio calculations (MP2/6-31+G(d,p)parallel to HF/6-31+G(d,p)) at given values of Phi(CNCN) and theta(COH) predict the same change in interaction energies with changes in theta(NHO) as the semiempirical calculations. With formamide, hydrogen-bond interaction energies are independent of the dihedral angle Phi(CNCN) when theta(COH) and theta(NHO) deviateless than 40 degrees from 180 degrees. Most importantly, the increased interaction energies at theta(COH) and theta(NHO) below 140 degrees and above 220 degrees are found to be associated with steric interference between the carbonyl oxygen of the hydrogen-bond acceptor and the amide nitrogen of the hydrogen-bond donor. Comparing formamide and N-methylacetamide, the angle requirements (theta(COH), theta(NHO), and Phi(CNCN)) of favorable hydrogen-bond interaction energies are much more stringent for the latter due to the steric effects of the methyl substituents. In summary, by both semiempirical SAM1 and ab initio MP2/6-3+G(d,p)parallel to HF/6-31+G(d,p) calculations, the strength of amide hydrogen bonding in the absence of steric hindrance is essentially independent of the angles defining the hydrogen bond.
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页码:7689 / 7693
页数:5
相关论文
共 22 条
[1]   VIBRATIONAL PROPERTIES OF THE PEPTIDE N-H BOND AS A FUNCTION OF HYDROGEN-BOND GEOMETRY - AN ABINITIO STUDY [J].
CHEAM, TC ;
KRIMM, S .
JOURNAL OF MOLECULAR STRUCTURE, 1986, 146 :175-189
[2]   AM1-SM2 AND PM3-SM3 PARAMETERIZED SCF SOLVATION MODELS FOR FREE-ENERGIES IN AQUEOUS-SOLUTION [J].
CRAMER, CJ ;
TRUHLAR, DG .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 1992, 6 (06) :629-666
[3]   HYDROGEN-BONDING IN A FAMILY OF TRIAMIDES - CONFORMATION-DIRECTING EFFECTS IN SOLUTION VS THE SOLID-STATE [J].
DADO, GP ;
DESPER, JM ;
GELLMAN, SH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (23) :8630-8632
[4]   SAM1 - THE 1ST OF A NEW SERIES OF GENERAL-PURPOSE QUANTUM-MECHANICAL MOLECULAR-MODELS [J].
DEWAR, MJS ;
JIE, CX ;
YU, JG .
TETRAHEDRON, 1993, 49 (23) :5003-5038
[5]   THE DEVELOPMENT AND USE OF QUANTUM-MECHANICAL MOLECULAR-MODELS .76. AM1 - A NEW GENERAL-PURPOSE QUANTUM-MECHANICAL MOLECULAR-MODEL [J].
DEWAR, MJS ;
ZOEBISCH, EG ;
HEALY, EF ;
STEWART, JJP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1985, 107 (13) :3902-3909
[6]   AMIDE-WATER AND AMIDE-AMIDE HYDROGEN-BOND STRENGTHS [J].
DIXON, DA ;
DOBBS, KD ;
VALENTINI, JJ .
JOURNAL OF PHYSICAL CHEMISTRY, 1994, 98 (51) :13435-13439
[7]   AMIDE-AMIDE AND AMIDE-WATER HYDROGEN-BONDS - IMPLICATIONS FOR PROTEIN-FOLDING AND STABILITY [J].
EBERHARDT, ES ;
RAINES, RT .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (05) :2149-2150
[8]  
Frisch M.J., 1995, GAUSSIAN 94 REVISION
[9]   EVALUATION OF THE CONFORMATION-DIRECTING EFFECTS OF SECONDARY HYDROGEN-BONDING INTERACTIONS IN FLEXIBLE TETRAPEPTIDE ANALOGS [J].
GARDNER, RR ;
GELLMAN, SH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (41) :10411-10412
[10]   CONFORMATION-DIRECTING EFFECTS OF A SINGLE INTRAMOLECULAR AMIDE-AMIDE HYDROGEN-BOND - VARIABLE-TEMPERATURE NMR AND IR STUDIES ON A HOMOLOGOUS DIAMIDE SERIES [J].
GELLMAN, SH ;
DADO, GP ;
LIANG, GB ;
ADAMS, BR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (04) :1164-1173