X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermaphilus HB8

被引:21
作者
Agari, Yoshihiro [1 ]
Yokoyama, Shigeyuki [1 ,2 ,3 ]
Kuramitsu, Seiki [1 ,4 ]
Shinkai, Akeo [1 ]
机构
[1] Harima Inst, RIKEN, SPring Ctr 8, Photon Sci Res Div, 1-1-1 Kouto, Sayo, Hyogo 6795148, Japan
[2] RIKEN, Yokohama Inst, Syst & Struct Biol Ctr, Yokohama, Kanagawa 2300045, Japan
[3] Univ Tokyo, Grad Sch Sci, Dept Biochem & Biophys, Bunkyo Ku, Tokyo 1130033, Japan
[4] Osaka Univ, Grad Sch Sci, Dept Biol Sci, Osaka 5600043, Japan
关键词
Cas protein; CRISPR; Cse2; pfam09485; structural genomics; thermophile; TTHB189;
D O I
10.1002/prot.22224
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
[No abstract available]
引用
收藏
页码:1063 / 1067
页数:5
相关论文
共 31 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]   Electrostatics of nanosystems: Application to microtubules and the ribosome [J].
Baker, NA ;
Sept, D ;
Joseph, S ;
Holst, MJ ;
McCammon, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (18) :10037-10041
[3]   CRISPR provides acquired resistance against viruses in prokaryotes [J].
Barrangou, Rodolphe ;
Fremaux, Christophe ;
Deveau, Helene ;
Richards, Melissa ;
Boyaval, Patrick ;
Moineau, Sylvain ;
Romero, Dennis A. ;
Horvath, Philippe .
SCIENCE, 2007, 315 (5819) :1709-1712
[4]   A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats [J].
Beloglazova, Natalia ;
Brown, Greg ;
Zimmerman, Matthew D. ;
Proudfoot, Michael ;
Makarova, Kira S. ;
Kudritska, Marina ;
Kochinyan, Samvel ;
Wang, Shuren ;
Chruszcz, Maksymilian ;
Minor, Wladek ;
Koonin, Eugene V. ;
Edwards, Aled M. ;
Savchenko, Alexei ;
Yakunin, Alexander F. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (29) :20361-20371
[5]   Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin [J].
Bolotin, A ;
Ouinquis, B ;
Sorokin, A ;
Ehrlich, SD .
MICROBIOLOGY-SGM, 2005, 151 :2551-2561
[6]   Comparative genomics of Thermus thermophilus:: Plasticity of the megaplasmid and its contribution to a thermophilic lifestyle [J].
Bruggemann, Holger ;
Chen, Chaoyin .
JOURNAL OF BIOTECHNOLOGY, 2006, 124 (04) :654-661
[7]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[8]   Phage response to CRISPR-Encoded resistance in Streptococcus thermophilus [J].
Deveau, Helene ;
Barrangou, Rodolphe ;
Garneau, Josiane E. ;
Labonte, Jessica ;
Fremaux, Christophe ;
Boyaval, Patrick ;
Romero, Dennis A. ;
Horvath, Philippe ;
Moineau, Sylvain .
JOURNAL OF BACTERIOLOGY, 2008, 190 (04) :1390-1400
[9]   Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain [J].
Ebihara, Akio ;
Yao, Min ;
Masui, Ryoji ;
Tanaka, Isao ;
Yokoyama, Shigeyuki ;
Kuramitsu, Seiki .
PROTEIN SCIENCE, 2006, 15 (06) :1494-1499
[10]   The repetitive DNA elements called CRISPRs and their associated genes: Evidence of horizontal transfer among prokaryotes [J].
Godde, James S. ;
Bickerton, Amanda .
JOURNAL OF MOLECULAR EVOLUTION, 2006, 62 (06) :718-729