Protein structural classes in five complete genomes

被引：56

作者：

Frishman, D

Mewes, HW

机构：

[1] MICPS (MIPS), Max-Plank-Institute for Biochemistry, 82152 Martinsried

来源：

NATURE STRUCTURAL BIOLOGY | 1997年 / 4卷 / 08期

关键词：

D O I：

10.1038/nsb0897-626

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The predicted distribution of globular proteins over folding types in five complete genomes differs from the tendencies observed in known protein structures. The ratio between the number of predicted membrane and globular proteins is conserved.

引用

页码：626 / 628

页数：3

共 33 条

[1]

[Anonymous], METHOD ENZYMOL

[2] PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].

BERNSTEIN, FC ;

KOETZLE, TF ;

WILLIAMS, GJB ;

MEYER, EF ;

BRICE, MD ;

RODGERS, JR ;

KENNARD, O ;

SHIMANOUCHI, T ;

TASUMI, M .

JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542

[3] COMPREHENSIVE SEQUENCE-ANALYSIS OF THE 182 PREDICTED OPEN READING FRAMES OF YEAST CHROMOSOME-III [J].

BORK, P ;

OUZOUNIS, C ;

SANDER, C ;

SCHARF, M ;

SCHNEIDER, R ;

SONNHAMMER, E .

PROTEIN SCIENCE, 1992, 1 (12) :1677-1690

[4] FROM GENOME SEQUENCES TO PROTEIN FUNCTION [J].

BORK, P ;

OUZOUNIS, C ;

SANDER, C .

CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (03) :393-403

[5] EXPLORING THE MYCOPLASMA-CAPRICOLUM GENOME - A MINIMAL CELL REVEALS ITS PHYSIOLOGY [J].

BORK, P ;

OUZOUNIS, C ;

CASARI, G ;

SCHNEIDER, R ;

SANDER, C ;

DOLAN, M ;

GILBERT, W ;

GILLEVET, PM .

MOLECULAR MICROBIOLOGY, 1995, 16 (05) :955-967

[6] GENE DUPLICATIONS IN HAEMOPHILUS-INFLUENZAE [J].

BRENNER, SE ;

HUBBARD, T ;

MURZIN, A ;

CHOTHIA, C .

NATURE, 1995, 378 (6553) :140-140

[7] Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii [J].

Bult, CJ ;

White, O ;

Olsen, GJ ;

Zhou, LX ;

Fleischmann, RD ;

Sutton, GG ;

Blake, JA ;

FitzGerald, LM ;

Clayton, RA ;

Gocayne, JD ;

Kerlavage, AR ;

Dougherty, BA ;

Tomb, JF ;

Adams, MD ;

Reich, CI ;

Overbeek, R ;

Kirkness, EF ;

Weinstock, KG ;

Merrick, JM ;

Glodek, A ;

Scott, JL ;

Geoghagen, NSM ;

Weidman, JF ;

Fuhrmann, JL ;

Nguyen, D ;

Utterback, TR ;

Kelley, JM ;

Peterson, JD ;

Sadow, PW ;

Hanna, MC ;

Cotton, MD ;

Roberts, KM ;

Hurst, MA ;

Kaine, BP ;

Borodovsky, M ;

Klenk, HP ;

Fraser, CM ;

Smith, HO ;

Woese, CR ;

Venter, JC .

SCIENCE, 1996, 273 (5278) :1058-1073

[8] Bioinformatics and the discovery of gene function [J].

Casari, G ;

deDaruvar, A ;

Sander, C ;

Schneider, R .

TRENDS IN GENETICS, 1996, 12 (07) :244-245

[9] PROTEINS - 1000 FAMILIES FOR THE MOLECULAR BIOLOGIST [J].

CHOTHIA, C .

NATURE, 1992, 357 (6379) :543-544

[10] WHOLE-GENOME RANDOM SEQUENCING AND ASSEMBLY OF HAEMOPHILUS-INFLUENZAE RD [J].

FLEISCHMANN, RD ;

ADAMS, MD ;

WHITE, O ;

CLAYTON, RA ;

KIRKNESS, EF ;

KERLAVAGE, AR ;

BULT, CJ ;

TOMB, JF ;

DOUGHERTY, BA ;

MERRICK, JM ;

MCKENNEY, K ;

SUTTON, G ;

FITZHUGH, W ;

FIELDS, C ;

GOCAYNE, JD ;

SCOTT, J ;

SHIRLEY, R ;

LIU, LI ;

GLODEK, A ;

KELLEY, JM ;

WEIDMAN, JF ;

PHILLIPS, CA ;

SPRIGGS, T ;

HEDBLOM, E ;

COTTON, MD ;

UTTERBACK, TR ;

HANNA, MC ;

NGUYEN, DT ;

SAUDEK, DM ;

BRANDON, RC ;

FINE, LD ;

FRITCHMAN, JL ;

FUHRMANN, JL ;

GEOGHAGEN, NSM ;

GNEHM, CL ;

MCDONALD, LA ;

SMALL, KV ;

FRASER, CM ;

SMITH, HO ;

VENTER, JC .

SCIENCE, 1995, 269 (5223) :496-512

← 1 2 3 4 →