Transcriptional noise and cellular heterogeneity in mammalian macrophages

被引:26
作者
Ramsey, S
Ozinsky, A
Clark, A
Smith, KD
de Atauri, P
Thorsson, V
Orrell, D
Bolouri, H
机构
[1] Inst Syst Biol, Seattle, WA 98103 USA
[2] Univ Washington, Dept Pathol, Seattle, WA 98195 USA
关键词
gene expression noise; size scaling; stochasticity; macrophage signalling;
D O I
10.1098/rstb.2005.1808
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Transcriptional noise is known to play a crucial role in heterogeneity in bacteria and yeast. Mammalian macrophages are known to exhibit cell-to-cell variation in their responses to pathogens, but the source of this heterogeneity is not known. We have developed a detailed stochastic model of gene expression that takes into account scaling effects due to cell size and genome complexity. We report the results of applying this model to simulating gene expression variability in mammalian macrophages, demonstrating a possible molecular basis for heterogeneity in macrophage signalling responses. We note that the nature of predicted transcriptional noise in macrophages is different from that in yeast and bacteria. Some molecular interactions in yeast and bacteria are thought to have evolved to minimize the effects of the high-frequency noise observed in these species. Transcriptional noise in macrophages results in slow changes to gene expression levels and would not require the type of spike-filtering circuits observed in yeast and bacteria.
引用
收藏
页码:495 / 506
页数:12
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